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  • Top cofit genes for PS417_08600 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: DNA-binding response regulator, LuxR family
    KEGG: two-component system, NarL family, response regulator EvgA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00390 ABC transporter substrate-binding protein no 0.25
    2 PS417_25650 anhydro-N-acetylmuramic acid kinase no 0.25
    3 PS417_22815 permease no 0.23
    4 PS417_25835 hypothetical protein no 0.23
    5 PS417_25840 SpoVR family protein no 0.23
    6 PS417_09210 TetR family transcriptional regulator no 0.23
    7 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.16 0.22
    8 PS417_12205 hypothetical protein no 0.22
    9 PS417_06840 beta-D-glucoside glucohydrolase no 0.21
    10 PS417_04435 uracil phosphoribosyltransferase no 0.21
    11 PS417_20100 hypothetical protein no 0.21
    12 PS417_10705 phospho-2-dehydro-3-deoxyheptonate aldolase no 0.20
    13 PS417_12110 ATP-binding protein no 0.20
    14 PS417_20025 alpha-ribazole phosphatase no 0.20
    15 PS417_08955 pimeloyl-CoA dehydrogenase no 0.19
    16 PS417_26230 electron transfer flavoprotein subunit alpha no 0.19
    17 PS417_25790 aminoglycoside phosphotransferase 0.14 0.19
    18 PS417_05395 glycosyl transferase family 51 no 0.18
    19 PS417_07620 beta-hexosaminidase no 0.18
    20 PS417_20850 hypothetical protein no 0.18

    Or look for negative cofitness