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Cofit
Protein
Homologs
Top cofit genes for GFF1690 from
Variovorax sp. SCN45
KEGG: DNA-binding protein H-NS
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7163
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)
no
0.70
2
GFF2191
Pca operon transcriptional activator PcaQ
no
0.61
3
GFF1470
Putative transposase InsK for insertion sequence element IS150
no
0.61
4
GFF4337
Electron transfer flavoprotein, alpha subunit
no
0.60
5
GFF3085
no description
no
0.60
6
GFF1932
no description
no
0.58
7
GFF3409
Probable lipoprotein signal peptide
no
0.57
8
GFF405
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
no
0.57
9
GFF5532
Putative oxidoreductase
no
0.57
10
GFF6439
Transcriptional regulator, LysR family
0.59
0.56
11
GFF2449
Beta-ureidopropionase (EC 3.5.1.6)
no
0.56
12
GFF6475
hypothetical protein
no
0.55
13
GFF5301
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.55
14
GFF2799
Molybdopterin-guanine dinucleotide biosynthesis protein MobB
no
0.55
15
GFF1219
SAM-dependent methyltransferase
no
0.54
16
GFF1472
Tricarboxylate transport protein TctC
no
0.53
17
GFF598
no description
no
0.53
18
GFF3864
Sigma factor RpoE negative regulatory protein RseA
no
0.52
19
GFF4788
Uncharacterized protein COG3236
no
0.52
20
GFF4973
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
no
0.52
Or look for
negative cofitness