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  • Top cofit genes for GFF1690 from Variovorax sp. SCN45

    KEGG: DNA-binding protein H-NS

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) no 0.70
    2 GFF2191 Pca operon transcriptional activator PcaQ no 0.61
    3 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.61
    4 GFF4337 Electron transfer flavoprotein, alpha subunit no 0.60
    5 GFF3085 no description no 0.60
    6 GFF1932 no description no 0.58
    7 GFF3409 Probable lipoprotein signal peptide no 0.57
    8 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) no 0.57
    9 GFF5532 Putative oxidoreductase no 0.57
    10 GFF6439 Transcriptional regulator, LysR family 0.59 0.56
    11 GFF2449 Beta-ureidopropionase (EC 3.5.1.6) no 0.56
    12 GFF6475 hypothetical protein no 0.55
    13 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.55
    14 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.55
    15 GFF1219 SAM-dependent methyltransferase no 0.54
    16 GFF1472 Tricarboxylate transport protein TctC no 0.53
    17 GFF598 no description no 0.53
    18 GFF3864 Sigma factor RpoE negative regulatory protein RseA no 0.52
    19 GFF4788 Uncharacterized protein COG3236 no 0.52
    20 GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.52

    Or look for negative cofitness