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  • Top cofit genes for PS417_08575 from Pseudomonas simiae WCS417

    MarR family transcriptional regulator
    SEED: Organic hydroperoxide resistance transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27585 diaminopimelate epimerase no 0.25
    2 PS417_20585 chemotaxis protein no 0.25
    3 PS417_00625 taurine dioxygenase no 0.24
    4 PS417_22210 AraC family transcriptional regulator 0.18 0.23
    5 PS417_08545 aromatic ring-opening dioxygenase LigB 0.20 0.23
    6 PS417_23580 peptidylprolyl isomerase no 0.22
    7 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.21
    8 PS417_00075 hypothetical protein 0.50 0.21
    9 PS417_20875 chromosome segregation protein SMC 0.82 0.20
    10 PS417_02555 exoribonuclease R 0.51 0.20
    11 PS417_19620 hypothetical protein 0.20 0.20
    12 PS417_25120 capsular biosynthesis protein no 0.20
    13 PS417_12920 endoribonuclease no 0.20
    14 PS417_06605 leucine/isoleucine/valine transporter permease subunit no 0.19
    15 PS417_24705 D-alanyl-D-alanine carboxypeptidase 0.83 0.19
    16 PS417_19635 lipid kinase no 0.19
    17 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.19
    18 PS417_03230 TetR family transcriptional regulator no 0.19
    19 PS417_19625 histidine kinase no 0.19
    20 PS417_00370 hypothetical protein 0.11 0.19

    Or look for negative cofitness