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  • Top cofit genes for PS417_08540 from Pseudomonas simiae WCS417

    RNA helicase
    SEED: DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
    KEGG: ATP-dependent RNA helicase DeaD

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21575 chemotaxis protein no 0.57
    2 PS417_05635 membrane protein no 0.56
    3 PS417_19650 chemotaxis protein CheW 0.26 0.55
    4 PS417_21390 hypothetical protein 0.63 0.54
    5 PS417_19660 cobalamin biosynthesis protein CobQ no 0.53
    6 PS417_18540 colicin V production CvpA no 0.53
    7 PS417_19725 flagellar biosynthesis protein FlhB 0.56 0.53
    8 PS417_19860 flagellar hook protein FlgL 0.63 0.52
    9 PS417_19690 histidine kinase 0.26 0.52
    10 PS417_21595 flagellar biosynthesis protein FlgN no 0.52
    11 PS417_21570 flagellar basal body rod protein FlgB 0.59 0.52
    12 PS417_19840 flagellar cap protein FliD 0.76 0.52
    13 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 0.54 0.52
    14 PS417_19675 chemotaxis protein CheY 0.65 0.52
    15 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.52
    16 PS417_19695 flagellar biosynthesis sigma factor 0.48 0.52
    17 PS417_21565 flagellar basal body rod protein FlgC 0.51 0.51
    18 PS417_19870 flagellar rod assembly protein FlgJ no 0.51
    19 PS417_19795 flagellar assembly protein FliH no 0.51
    20 PS417_19755 flagellar motor switch protein FliM 0.55 0.51

    Or look for negative cofitness