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  • Top cofit genes for PS417_08530 from Pseudomonas simiae WCS417

    spermidine synthase
    SEED: Spermidine synthase (EC 2.5.1.16)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24500 DEAD/DEAH box helicase 0.24 0.46
    2 PS417_26370 RNA helicase no 0.41
    3 PS417_03005 arginine decarboxylase no 0.39
    4 PS417_21630 magnesium transporter no 0.38
    5 PS417_22565 formyltetrahydrofolate deformylase no 0.37
    6 PS417_21575 chemotaxis protein no 0.37
    7 PS417_24335 50S rRNA methyltransferase no 0.36
    8 PS417_19885 flagellar basal body rod protein FlgG no 0.36
    9 PS417_19880 flagellar basal body L-ring protein no 0.35
    10 PS417_19840 flagellar cap protein FliD no 0.35
    11 PS417_21565 flagellar basal body rod protein FlgC no 0.35
    12 PS417_19650 chemotaxis protein CheW 0.15 0.35
    13 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.35
    14 PS417_21595 flagellar biosynthesis protein FlgN 0.51 0.35
    15 PS417_19690 histidine kinase no 0.35
    16 PS417_19860 flagellar hook protein FlgL no 0.34
    17 PS417_01340 agmatine deiminase 0.27 0.34
    18 PS417_19660 cobalamin biosynthesis protein CobQ no 0.34
    19 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.34
    20 PS417_19825 ATPase AAA 0.17 0.34

    Or look for negative cofitness