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Cofit
Protein
Homologs
Top cofit genes for PS417_08530 from
Pseudomonas simiae WCS417
spermidine synthase
SEED: Spermidine synthase (EC 2.5.1.16)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_24500
DEAD/DEAH box helicase
0.24
0.46
2
PS417
_26370
RNA helicase
no
0.41
3
PS417
_03005
arginine decarboxylase
no
0.39
4
PS417
_21630
magnesium transporter
no
0.38
5
PS417
_22565
formyltetrahydrofolate deformylase
no
0.37
6
PS417
_21575
chemotaxis protein
no
0.37
7
PS417
_24335
50S rRNA methyltransferase
no
0.36
8
PS417
_19885
flagellar basal body rod protein FlgG
no
0.36
9
PS417
_19880
flagellar basal body L-ring protein
no
0.35
10
PS417
_19840
flagellar cap protein FliD
0.17
0.35
11
PS417
_21565
flagellar basal body rod protein FlgC
no
0.35
12
PS417
_19650
chemotaxis protein CheW
0.15
0.35
13
PS417
_21585
flagellar basal body P-ring biosynthesis protein FlgA
0.36
0.35
14
PS417
_21595
flagellar biosynthesis protein FlgN
0.51
0.35
15
PS417
_19690
histidine kinase
no
0.35
16
PS417
_19860
flagellar hook protein FlgL
no
0.34
17
PS417
_01340
agmatine deiminase
0.27
0.34
18
PS417
_19660
cobalamin biosynthesis protein CobQ
no
0.34
19
PS417
_19850
branched-chain alpha-keto acid dehydrogenase subunit E2
no
0.34
20
PS417
_19825
ATPase AAA
0.17
0.34
Or look for
negative cofitness