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  • Top cofit genes for GFF1672 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.57
    2 GFF3573 Efflux ABC transporter, ATP-binding protein no 0.56
    3 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.55
    4 GFF1416 no description no 0.54
    5 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.53
    6 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.53
    7 GFF1548 Tripartite tricarboxylate transporter TctA family no 0.52
    8 GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) no 0.52
    9 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.52
    10 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.51
    11 GFF6650 no description no 0.51
    12 GFF4883 Translation-disabling ACNase RloC no 0.50
    13 GFF2691 no description no 0.49
    14 GFF1052 hypothetical protein no 0.49
    15 GFF3781 Transcriptional regulator, AcrR family no 0.47
    16 GFF5177 hypothetical protein no 0.47
    17 GFF1708 no description no 0.47
    18 GFF3158 Sulfite dehydrogenase (quinone), iron-sulfur subunit SoeB (EC 1.8.5.6) no 0.47
    19 GFF1646 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching no 0.46
    20 GFF4128 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.45

    Or look for negative cofitness