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  • Top cofit genes for PS417_08500 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25970 diguanylate cyclase no 0.27
    2 PS417_12965 aminotransferase no 0.26
    3 PS417_12145 acetoacetyl-CoA synthetase 0.23 0.23
    4 PS417_27600 HAD family hydrolase 0.34 0.22
    5 PS417_22390 lactate dehydrogenase no 0.22
    6 PS417_28250 cell wall assembly protein no 0.22
    7 PS417_04675 deoxyribonuclease no 0.21
    8 PS417_08390 transcription elongation factor GreB no 0.21
    9 PS417_15695 molybdenum cofactor biosynthesis protein A no 0.21
    10 PS417_15530 ribonuclease no 0.20
    11 PS417_24680 murein transglycosylase no 0.20
    12 PS417_24265 ABC transporter ATP-binding protein no 0.20
    13 PS417_05960 chemotaxis protein no 0.20
    14 PS417_20280 mechanosensitive ion channel protein MscS no 0.20
    15 PS417_18355 DNA-binding protein no 0.19
    16 PS417_19055 ArsR family transcriptional regulator no 0.19
    17 PS417_27630 MFS transporter no 0.19
    18 PS417_02880 copper chaperone no 0.19
    19 PS417_26775 thiazole synthase 0.46 0.18
    20 PS417_09645 TonB-dependent receptor no 0.18

    Or look for negative cofitness