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  • Top cofit genes for GFF1670 from Variovorax sp. SCN45

    3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5593 no description no 0.55
    2 GFF6821 ribonuclease H no 0.50
    3 GFF1757 hypothetical protein no 0.50
    4 GFF2956 Uncharacterized protein YfaT no 0.49
    5 GFF4581 hypothetical protein no 0.49
    6 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.48
    7 GFF1589 FIG00765372: hypothetical protein no 0.48
    8 GFF3705 Amidases related to nicotinamidase no 0.48
    9 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) no 0.48
    10 GFF11 Two-component transcriptional response regulator, OmpR family no 0.48
    11 GFF1914 Guanine deaminase (EC 3.5.4.3) no 0.47
    12 GFF85 Transcriptional regulator, LysR family no 0.47
    13 GFF1501 hypothetical protein no 0.46
    14 GFF598 no description no 0.46
    15 GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.46
    16 GFF6802 Uncharacterized MFS-type transporter no 0.46
    17 GFF3462 Urea ABC transporter, permease protein UrtC no 0.46
    18 GFF1836 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) no 0.45
    19 GFF1278 no description no 0.45
    20 GFF3428 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.45

    Or look for negative cofitness