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Cofit
Protein
Homologs
Top cofit genes for GFF1658 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2680
Protein of unknown function DUF1058
no
0.71
2
GFF3963
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
no
0.61
3
GFF1775
no description
no
0.60
4
GFF3974
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.59
5
GFF2229
Pca regulon regulatory protein PcaR
no
0.59
6
GFF710
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
no
0.59
7
GFF5546
Lactam utilization protein LamB
0.53
0.58
8
GFF4634
Transketolase, C-terminal section (EC 2.2.1.1)
no
0.58
9
GFF4099
Ser/Thr protein phosphatase family protein
no
0.58
10
GFF3030
Uncharacterized protein ImpA
no
0.57
11
GFF5984
L-lactate dehydrogenase
no
0.57
12
GFF5788
FIG004556: membrane metalloprotease
0.39
0.57
13
GFF1166
Murein-DD-endopeptidase (EC 3.4.99.-)
no
0.56
14
GFF1611
no description
no
0.56
15
GFF2190
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
0.30
0.54
16
GFF627
Secretion protein HlyD
no
0.54
17
GFF2855
Putative hydrolase or acyltransferase
0.14
0.53
18
GFF669
BUG/TctC family periplasmic protein
no
0.53
19
GFF4945
probable GntR-family transcriptional regulator
no
0.53
20
GFF1479
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.53
Or look for
negative cofitness