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  • Top cofit genes for GFF1650 from Variovorax sp. SCN45

    NmrA-like
    SEED: NmrA-like

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.59
    2 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.56
    3 GFF3356 Probable transmembrane protein no 0.54
    4 GFF2605 Tricarboxylate transport sensor protein TctE no 0.53
    5 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.53
    6 GFF4420 Conjugative transfer protein TrbL no 0.52
    7 GFF5785 FIG00931285: hypothetical protein no 0.51
    8 GFF4002 Putative transmembrane protein no 0.49
    9 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.48
    10 GFF6266 putative lipoprotein no 0.48
    11 GFF905 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.47
    12 GFF6372 T6SS component TssB (ImpB/VipA) no 0.47
    13 GFF4846 Conjugative transfer protein TrbE no 0.47
    14 GFF4604 TesB-like acyl-CoA thioesterase 2 no 0.47
    15 GFF6742 NAD(P)H-flavin oxidoreductase no 0.47
    16 GFF1420 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.47
    17 GFF1452 Predicted gluconate TRAP family transporter, DctM subunit no 0.47
    18 GFF6058 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.47
    19 GFF3072 Putative transmembrane protein no 0.46
    20 GFF3391 Chlorogenate esterase no 0.46

    Or look for negative cofitness