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  • Top cofit genes for GFF1646 from Variovorax sp. SCN45

    Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
    SEED: Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4414 Conjugative transfer protein TrbB no 0.62
    2 GFF3563 L-carnitine dehydratase/bile acid-inducible protein F no 0.59
    3 GFF1394 no description no 0.58
    4 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.57
    5 GFF4107 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.55
    6 GFF6391 RfbJ protein no 0.55
    7 GFF3202 no description no 0.54
    8 GFF1416 no description no 0.52
    9 GFF6999 Flagellar P-ring protein FlgI no 0.52
    10 GFF7167 Pirin no 0.52
    11 GFF4120 no description no 0.51
    12 GFF4198 putative LuxA no 0.51
    13 GFF788 hypothetical protein no 0.51
    14 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) no 0.50
    15 GFF2945 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) no 0.49
    16 GFF1707 no description no 0.48
    17 GFF4308 hypothetical protein no 0.48
    18 GFF3934 PhnB protein no 0.48
    19 GFF3781 Transcriptional regulator, AcrR family no 0.47
    20 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.47

    Or look for negative cofitness