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  • Top cofit genes for PS417_08375 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: gliding motility protein GldF
    KEGG: ABC-2 type transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21910 LamB/YcsF family protein no 0.24
    2 PS417_15775 short-chain dehydrogenase no 0.24
    3 PS417_03065 peptidase A24 no 0.24
    4 PS417_10625 membrane protein no 0.23
    5 PS417_09045 histidine kinase no 0.21
    6 PS417_03895 methyltransferase no 0.20
    7 PS417_24985 hypothetical protein no 0.20
    8 PS417_08635 ammonium transporter no 0.20
    9 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase no 0.20
    10 PS417_19475 pseudouridine synthase no 0.19
    11 PS417_11175 AraC family transcriptional regulator no 0.18
    12 PS417_05725 baseplate J protein no 0.18
    13 PS417_11840 GntR family transcriptional regulator no 0.18
    14 PS417_05510 alpha/beta hydrolase no 0.18
    15 PS417_10385 peroxiredoxin no 0.18
    16 PS417_09560 TonB-dependent receptor no 0.18
    17 PS417_04785 hypothetical protein no 0.18
    18 PS417_23790 sulfoxide reductase catalytic subunit YedY no 0.18
    19 PS417_20825 drug:proton antiporter no 0.17
    20 PS417_17165 2,4-dienoyl-CoA reductase 0.93 0.17

    Or look for negative cofitness