Top cofit genes for GFF1645 from Variovorax sp. SCN45

Sigma factor PvdS, controling pyoverdin biosynthesis
SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank Hit Name Description Conserved? Cofitness  
1 GFF1185 Transcriptional regulator, AraC family no 0.57
2 GFF1041 Transcriptional regulator, AsnC family no 0.55
3 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy no 0.51
4 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) 0.22 0.49
5 GFF1175 Two-component system response regulator QseB no 0.49
6 GFF2463 Response regulator BaeR no 0.49
7 GFF1965 Magnesium and cobalt efflux protein CorC no 0.49
8 GFF6604 FIG00457034: hypothetical protein no 0.48
9 GFF6126 putative membrane protein no 0.48
10 GFF4336 BUG/TctC family periplasmic protein no 0.48
11 GFF587 Multimeric flavodoxin WrbA no 0.47
12 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 no 0.47
13 GFF1599 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.47
14 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.20 0.47
15 GFF7339 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.46
16 GFF3381 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.46
17 GFF1389 Paraquat-inducible protein B no 0.46
18 GFF4435 hypothetical protein no 0.46
19 GFF3206 no description no 0.45
20 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) no 0.45

Or look for negative cofitness