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  • Top cofit genes for GFF1643 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1438 Putative type-1 secretion protein no 0.52
    2 GFF2967 ClpXP protease specificity-enhancing factor / Stringent starvation protein B no 0.50
    3 GFF762 Putative inner membrane protein no 0.50
    4 GFF1474 Melibiose operon regulatory protein 0.48 0.49
    5 GFF3702 hypothetical protein no 0.47
    6 GFF2763 Nitrate/nitrite transporter no 0.47
    7 GFF2264 L-rhamnose isomerase (EC 5.3.1.14) no 0.47
    8 GFF1201 Outer membrane protein assembly factor YaeT precursor no 0.46
    9 GFF1790 FIG00634494: possible peptidase no 0.46
    10 GFF1176 IncF plasmid conjugative transfer protein TrbE no 0.46
    11 GFF4801 Alkaline phosphatase isozyme conversion protein precursor (EC 3.4.11.-) no 0.46
    12 GFF625 Type IV pilus biogenesis protein PilN 0.34 0.44
    13 GFF3461 hypothetical protein no 0.44
    14 GFF675 Excinuclease ABC subunit B no 0.44
    15 GFF2119 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family no 0.43
    16 GFF1521 rRNA small subunit methyltransferase I no 0.43
    17 GFF4223 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.42
    18 GFF1850 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) 0.34 0.42
    19 GFF61 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1 no 0.42
    20 GFF4745 secretion chaparone no 0.42

    Or look for negative cofitness