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Cofit
Protein
Homologs
Top cofit genes for GFF1643 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1438
Putative type-1 secretion protein
no
0.52
2
GFF2967
ClpXP protease specificity-enhancing factor / Stringent starvation protein B
no
0.50
3
GFF762
Putative inner membrane protein
no
0.50
4
GFF1474
Melibiose operon regulatory protein
no
0.49
5
GFF3702
hypothetical protein
no
0.47
6
GFF2763
Nitrate/nitrite transporter
no
0.47
7
GFF2264
L-rhamnose isomerase (EC 5.3.1.14)
no
0.47
8
GFF1201
Outer membrane protein assembly factor YaeT precursor
no
0.46
9
GFF1790
FIG00634494: possible peptidase
no
0.46
10
GFF1176
IncF plasmid conjugative transfer protein TrbE
no
0.46
11
GFF4801
Alkaline phosphatase isozyme conversion protein precursor (EC 3.4.11.-)
no
0.46
12
GFF625
Type IV pilus biogenesis protein PilN
0.53
0.44
13
GFF3461
hypothetical protein
no
0.44
14
GFF675
Excinuclease ABC subunit B
no
0.44
15
GFF2119
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
no
0.43
16
GFF1521
rRNA small subunit methyltransferase I
no
0.43
17
GFF4223
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.42
18
GFF1850
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-)
0.50
0.42
19
GFF61
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1
no
0.42
20
GFF4745
secretion chaparone
no
0.42
Or look for
negative cofitness