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  • Top cofit genes for GFF1641 from Variovorax sp. SCN45

    Polyketide synthase modules and related proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3936 no description no 0.61
    2 GFF4180 hypothetical protein no 0.59
    3 GFF1843 Xanthine/uracil/thiamine/ascorbate permease family protein no 0.58
    4 GFF5774 RNA polymerase sigma factor for flagellar operon no 0.55
    5 GFF4782 Pyridoxal-5'-phosphate-dependent enzyme beta superfamily (fold type II) no 0.55
    6 GFF6693 Two-component transcriptional response regulator, LuxR family no 0.54
    7 GFF4273 BUG/TctC family periplasmic protein no 0.53
    8 GFF4620 Gluconolactonase (EC 3.1.1.17) no 0.52
    9 GFF131 L-glyceraldehyde 3-phosphate reductase no 0.52
    10 GFF3285 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.51
    11 GFF3080 no description no 0.51
    12 GFF7325 Glucans biosynthesis glucosyltransferase H no 0.51
    13 GFF231 DNA ligase (ATP) (EC 6.5.1.1) no 0.51
    14 GFF2824 TonB-dependent hemin, ferrichrome receptor no 0.50
    15 GFF3788 putative secreted protein no 0.50
    16 GFF3915 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain no 0.49
    17 GFF418 Endonuclease III (EC 4.2.99.18) 0.35 0.48
    18 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily no 0.48
    19 GFF5438 Glutathione peroxidase (EC 1.11.1.9) no 0.48
    20 GFF1439 putative inositol monophosphatase no 0.47

    Or look for negative cofitness