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  • Top cofit genes for GFF1639 from Variovorax sp. SCN45

    Polyketide synthase modules and related proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1137 FIG00348850: hypothetical protein no 0.58
    2 GFF769 Conserved TM helix no 0.58
    3 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.55
    4 GFF228 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.55
    5 GFF2136 Ribokinase (EC 2.7.1.15) no 0.55
    6 GFF7271 Transcriptional regulator, LacI family no 0.53
    7 GFF3158 Sulfite dehydrogenase (quinone), iron-sulfur subunit SoeB (EC 1.8.5.6) no 0.53
    8 GFF5892 Lysine exporter protein LysE/YggA no 0.53
    9 GFF3466 FIG00932805: hypothetical protein no 0.52
    10 GFF1556 Tricarboxylate transport protein TctC no 0.52
    11 GFF1370 Transcriptional regulator associated with Tricarboxylic transport no 0.52
    12 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.51
    13 GFF1708 no description no 0.51
    14 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    15 GFF2825 Alkyl hydroperoxide reductase protein F no 0.51
    16 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) no 0.51
    17 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.50
    18 GFF2246 cellular communication/signal transduction no 0.50
    19 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) no 0.50
    20 GFF6368 T6SS lysozyme-like component TssE no 0.49

    Or look for negative cofitness