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  • Top cofit genes for PS417_08340 from Pseudomonas simiae WCS417

    type IV secretion protein Rhs
    SEED: Rhs family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12470 hypothetical protein no 0.28
    2 PS417_26950 LysR family transcriptional regulator no 0.23
    3 PS417_11230 hydroxyacid dehydrogenase 0.49 0.21
    4 PS417_04190 phosphatidylcholine-hydrolyzing phospholipase no 0.21
    5 PS417_09640 capsular biosynthesis protein 0.13 0.21
    6 PS417_24550 ATP-dependent helicase no 0.20
    7 PS417_14420 acyl-CoA dehydrogenase no 0.20
    8 PS417_20175 LysR family transcriptional regulator no 0.20
    9 PS417_25005 molecular chaperone no 0.20
    10 PS417_21935 transcriptional regulator no 0.20
    11 PS417_20860 DNA polymerase III subunit gamma/tau no 0.20
    12 PS417_04890 ATP-dependent RNA helicase RhlB no 0.20
    13 PS417_07280 LysR family transcriptional regulator no 0.19
    14 PS417_08520 hypothetical protein no 0.19
    15 PS417_27060 2OG-Fe(II) oxygenase no 0.19
    16 PS417_17700 LysR family transcriptional regulator no 0.19
    17 PS417_12895 pyruvate dehydrogenase no 0.19
    18 PS417_02920 hypothetical protein no 0.19
    19 PS417_03800 pilus assembly protein 0.43 0.18
    20 PS417_26195 serine hydroxymethyltransferase no 0.18

    Or look for negative cofitness