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  • Top cofit genes for GFF1635 from Variovorax sp. SCN45

    Polyketide synthase modules and related proteins
    SEED: Non-ribosomal peptide synthetase modules, pyoverdine??

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1555 Transcriptional regulator, LysR family no 0.57
    2 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) no 0.55
    3 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) no 0.54
    4 GFF1864 Transcriptional regulator, LysR family no 0.52
    5 GFF5093 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) no 0.51
    6 GFF1063 dioxygenase, TauD/TfdA family no 0.50
    7 GFF3565 Acyl-CoA dehydrogenase no 0.49
    8 GFF1279 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.48
    9 GFF4416 Conjugative transfer protein TrbD no 0.48
    10 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.47
    11 GFF1700 hypothetical protein no 0.47
    12 GFF2692 hypothetical protein no 0.46
    13 GFF3541 hypothetical protein no 0.46
    14 GFF5123 no description no 0.46
    15 GFF2907 Glucarate dehydratase (EC 4.2.1.40) no 0.46
    16 GFF3542 hypothetical protein no 0.45
    17 GFF1362 no description no 0.45
    18 GFF6662 hypothetical protein no 0.44
    19 GFF1217 Transcriptional regulator RpiR in protein degradation cluster no 0.43
    20 GFF1810 Histidinol phosphatase and related hydrolases of the PHP family no 0.43

    Or look for negative cofitness