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  • Top cofit genes for GFF1633 from Variovorax sp. SCN45

    Probable transmembrane sensor
    SEED: Probable transmembrane sensor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.53
    2 GFF7167 Pirin no 0.52
    3 GFF5098 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.49
    4 GFF4388 Type IV secretory pathway, protease TraF no 0.49
    5 GFF5770 Flagellar biosynthesis protein FlhB no 0.48
    6 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.48
    7 GFF3553 FOG: TPR repeat no 0.47
    8 GFF5737 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) no 0.47
    9 GFF3946 Probable low-affinity inorganic phosphate transporter no 0.47
    10 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.47
    11 GFF5680 Phosphoglycolate phosphatase (EC 3.1.3.18) no 0.46
    12 GFF6988 Flagellar hook protein FlgE no 0.46
    13 GFF507 Hydrolase, alpha/beta fold family no 0.46
    14 GFF5169 hypothetical protein no 0.46
    15 GFF1746 BUG/TctC family periplasmic protein no 0.46
    16 GFF3368 Pyrimidine permease no 0.46
    17 GFF1767 no description no 0.45
    18 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.45
    19 GFF1418 Transcriptional regulator, LysR family no 0.45
    20 GFF5956 FIG01055484: hypothetical protein no 0.44

    Or look for negative cofitness