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Cofit
Protein
Homologs
Top cofit genes for GFF1633 from
Variovorax sp. SCN45
Probable transmembrane sensor
SEED: Probable transmembrane sensor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6446
Xaa-Pro aminopeptidase (EC 3.4.11.9)
no
0.53
2
GFF7167
Pirin
no
0.52
3
GFF5098
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)
no
0.49
4
GFF4388
Type IV secretory pathway, protease TraF
no
0.49
5
GFF5770
Flagellar biosynthesis protein FlhB
no
0.48
6
GFF4579
putative oxidoreductase, nitronate monooxygenase family
no
0.48
7
GFF3553
FOG: TPR repeat
no
0.47
8
GFF5737
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54)
no
0.47
9
GFF3946
Probable low-affinity inorganic phosphate transporter
no
0.47
10
GFF3506
Superoxide dismutase [Fe] (EC 1.15.1.1)
no
0.47
11
GFF5680
Phosphoglycolate phosphatase (EC 3.1.3.18)
no
0.46
12
GFF6988
Flagellar hook protein FlgE
no
0.46
13
GFF507
Hydrolase, alpha/beta fold family
no
0.46
14
GFF5169
hypothetical protein
no
0.46
15
GFF1746
BUG/TctC family periplasmic protein
no
0.46
16
GFF3368
Pyrimidine permease
no
0.46
17
GFF1767
no description
no
0.45
18
GFF6208
Cytosine/purine/uracil/thiamine/allantoin permease family protein
no
0.45
19
GFF1418
Transcriptional regulator, LysR family
no
0.45
20
GFF5956
FIG01055484: hypothetical protein
no
0.44
Or look for
negative cofitness