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  • Top cofit genes for PS417_08305 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: sensor histidine kinase
    KEGG: two-component system, OmpR family, KDP operon response regulator KdpE

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.38 0.23
    2 PS417_13650 LacI family transcriptional regulator no 0.22
    3 PS417_13480 serine protease 0.50 0.22
    4 PS417_12175 peptide ABC transporter permease no 0.22
    5 PS417_21945 RNA polymerase subunit sigma-24 no 0.22
    6 PS417_25005 molecular chaperone no 0.20
    7 PS417_09675 alpha/beta hydrolase no 0.20
    8 PS417_07940 hypothetical protein no 0.20
    9 PS417_25370 hypothetical protein no 0.20
    10 PS417_23040 D-trehalose outer membrane porin (from data) no 0.20
    11 PS417_11790 ABC transporter substrate-binding protein no 0.20
    12 PS417_03125 potassium ABC transporter ATPase 0.43 0.20
    13 PS417_07805 hypothetical protein no 0.19
    14 PS417_02740 LysR family transcriptional regulator no 0.19
    15 PS417_09660 lysine transporter LysE 0.30 0.19
    16 PS417_11550 FAD-binding oxidoreductase 0.42 0.19
    17 PS417_15640 DNA methylase no 0.19
    18 PS417_25280 methyltransferase no 0.19
    19 PS417_22215 membrane protein no 0.19
    20 PS417_12610 RNA polymerase sigma factor 0.27 0.18

    Or look for negative cofitness