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Cofit
Protein
Homologs
Top cofit genes for GFF1625 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7172
Manganese transport protein MntH
no
0.56
2
GFF3572
Efflux ABC transporter, permease protein
no
0.52
3
GFF677
FIG00931906: hypothetical protein
no
0.51
4
GFF1920
Cysteine dioxygenase (EC 1.13.11.20)
no
0.51
5
GFF1329
Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12)
no
0.50
6
GFF5747
Flagellum-specific ATP synthase FliI
no
0.50
7
GFF10
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
no
0.48
8
GFF6815
FIG00453801: hypothetical protein
no
0.48
9
GFF1761
Putative hemolysin
no
0.47
10
GFF1742
hypothetical protein
no
0.47
11
GFF4895
FIG074102: hypothetical protein
no
0.46
12
GFF3245
hypothetical protein
no
0.46
13
GFF4280
oxidoreductase FAD/NAD(P)-binding domain protein
no
0.46
14
GFF4483
ATP-dependent hsl protease ATP-binding subunit HslU
0.16
0.45
15
GFF6014
Transcriptional regulator, LysR family
no
0.45
16
GFF3177
hypothetical protein
no
0.45
17
GFF6613
no description
no
0.45
18
GFF5905
FIG01150669: hypothetical protein
no
0.45
19
GFF328
hypothetical protein
no
0.44
20
GFF4259
Transcriptional regulator, DeoR family
0.25
0.43
Or look for
negative cofitness