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  • Top cofit genes for PS417_08230 from Pseudomonas simiae WCS417

    lipopolysaccharide biosynthesis protein RfbH
    SEED: CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase (EC 4.2.1.-)
    KEGG: CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08225 acetolactate synthase no 0.83
    2 PS417_08195 hypothetical protein no 0.82
    3 PS417_08205 acetyltransferase no 0.79
    4 PS417_08200 hypothetical protein no 0.74
    5 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase 0.84 0.72
    6 PS417_08190 membrane protein no 0.70
    7 PS417_20665 hypothetical protein no 0.66
    8 PS417_25100 hypothetical protein no 0.63
    9 PS417_20645 membrane protein no 0.62
    10 PS417_20650 hypothetical protein no 0.61
    11 PS417_20610 hypothetical protein no 0.61
    12 PS417_08220 epimerase no 0.60
    13 PS417_08180 glycosyl transferase no 0.59
    14 PS417_08185 glycosyl transferase no 0.59
    15 PS417_20655 group 1 glycosyl transferase no 0.57
    16 PS417_20660 hypothetical protein no 0.56
    17 PS417_25105 hypothetical protein no 0.55
    18 PS417_19075 ABC transporter ATP-binding protein no 0.55
    19 PS417_25120 capsular biosynthesis protein no 0.54
    20 PS417_08165 UDP-glucose 4-epimerase no 0.54

    Or look for negative cofitness