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  • Top cofit genes for GFF1613 from Variovorax sp. SCN45

    Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1)
    SEED: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
    KEGG: phosphonate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.45
    2 GFF4995 no description no 0.44
    3 GFF843 no description no 0.43
    4 GFF5257 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.42
    5 GFF3079 hypothetical protein no 0.42
    6 GFF6923 Acetate permease ActP (cation/acetate symporter) no 0.40
    7 GFF3080 no description no 0.39
    8 GFF1692 Two-component system sensor histidine kinase no 0.39
    9 GFF5911 Probable L-amino-acid oxidase (EC 1.4.3.2) no 0.39
    10 GFF1925 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.39
    11 GFF3262 Polymer-forming bactofilin no 0.38
    12 GFF5018 Uncharacterized protein YpeB no 0.38
    13 GFF1411 Two-component transcriptional response regulator, LuxR family no 0.38
    14 GFF6449 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) no 0.38
    15 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.37
    16 GFF5761 Flagellar motor rotation protein MotA no 0.37
    17 GFF4563 Ferredoxin, 2Fe-2S no 0.37
    18 GFF768 Trehalose synthase (EC 5.4.99.16) no 0.37
    19 GFF2521 FIG00931781: hypothetical protein no 0.37
    20 GFF6014 Transcriptional regulator, LysR family no 0.36

    Or look for negative cofitness