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  • Top cofit genes for GFF1610 from Variovorax sp. SCN45

    Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
    SEED: Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
    KEGG: succinate-semialdehyde dehydrogenase (NADP+)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF436 LrgA-associated membrane protein LrgB no 0.57
    2 GFF3217 hypothetical protein no 0.54
    3 GFF5795 esterase, PHB depolymerase family no 0.50
    4 GFF2318 Transcriptional regulator ArgP, LysR family no 0.46
    5 GFF2681 Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue no 0.44
    6 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.44
    7 GFF3472 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.42
    8 GFF336 no description no 0.42
    9 GFF2541 FIG00899427: hypothetical protein no 0.42
    10 GFF6851 no description no 0.42
    11 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.42
    12 GFF6362 Pentapeptide repeat family protein no 0.42
    13 GFF5833 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.42
    14 GFF5789 YciO protein, TsaC/YrdC paralog no 0.41
    15 GFF2867 DNA recombination protein RmuC no 0.41
    16 GFF1863 Uncharacterized MFS-type transporter no 0.40
    17 GFF1302 DoxX family protein no 0.40
    18 GFF1499 BUG/TctC family periplasmic protein no 0.40
    19 GFF5527 Asl0046 protein no 0.40
    20 GFF3678 D-alanine aminotransferase (EC 2.6.1.21) no 0.39

    Or look for negative cofitness