• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_00810 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-E factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20220 membrane protein 0.44 0.18
    2 PS417_14290 trehalose synthase no 0.18
    3 PS417_24155 ATP-binding protein no 0.17
    4 PS417_25755 spermidine/putrescine ABC transporter substrate-binding protein no 0.17
    5 PS417_22690 phosphogluconate dehydratase no 0.17
    6 PS417_12315 peptidylprolyl isomerase no 0.16
    7 PS417_03995 Fe(II)-dependent oxygenase 0.23 0.16
    8 PS417_15710 nitrate reductase no 0.16
    9 PS417_21920 transcriptional regulator no 0.16
    10 PS417_20360 serine/threonine protein phosphatase 0.23 0.16
    11 PS417_10015 hypothetical protein no 0.16
    12 PS417_00570 NADP transhydrogenase subunit alpha no 0.15
    13 PS417_03325 acid phosphatase no 0.15
    14 PS417_26625 hypothetical protein no 0.15
    15 PS417_15980 histidine kinase no 0.15
    16 PS417_01890 TetR family transcriptional regulator no 0.15
    17 PS417_27535 chemotaxis protein CheY no 0.15
    18 PS417_23425 hypothetical protein no 0.15
    19 PS417_01710 histidine utilization repressor 0.21 0.15
    20 PS417_09225 C4-dicarboxylate ABC transporter no 0.15

    Or look for negative cofitness