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  • Top cofit genes for GFF1609 from Variovorax sp. SCN45

    2-haloalkanoic acid dehalogenase (EC 3.8.1.2)
    SEED: 2-haloalkanoic acid dehalogenase
    KEGG: 2-haloacid dehalogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4292 no description no 0.67
    2 GFF2650 hypothetical protein 0.18 0.62
    3 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein no 0.61
    4 GFF2822 Periplasmic hemin-binding protein no 0.56
    5 GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.55
    6 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.55
    7 GFF6958 no description no 0.54
    8 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    9 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.53
    10 GFF3956 no description no 0.53
    11 GFF3320 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.53
    12 GFF686 porin, Gram-negative type no 0.52
    13 GFF3231 hypothetical protein no 0.52
    14 GFF6011 putative decarboxylase no 0.51
    15 GFF5390 RecA protein 0.23 0.51
    16 GFF3588 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.51
    17 GFF2718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.50
    18 GFF4383 hypothetical protein no 0.49
    19 GFF3050 Lactam utilization protein LamB no 0.49
    20 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) no 0.49

    Or look for negative cofitness