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  • Top cofit genes for GFF1608 from Variovorax sp. SCN45

    Aminotransferase, class III
    SEED: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.63
    2 GFF4581 hypothetical protein no 0.59
    3 GFF3654 DUF1275 domain-containing protein no 0.57
    4 GFF1801 Transcriptional regulator, LysR family 0.19 0.55
    5 GFF2357 DNA repair protein RecN no 0.55
    6 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.53
    7 GFF6099 Ser/Thr protein phosphatase family protein no 0.53
    8 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.53
    9 GFF5114 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF 0.29 0.52
    10 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.52
    11 GFF4719 hypothetical protein no 0.52
    12 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein no 0.52
    13 GFF3152 hypothetical protein no 0.52
    14 GFF2476 Tripartite tricarboxylate transporter TctB family no 0.51
    15 GFF7021 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    16 GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) no 0.51
    17 GFF7073 no description no 0.50
    18 GFF4292 no description no 0.50
    19 GFF6978 no description no 0.50
    20 GFF3120 no description no 0.50

    Or look for negative cofitness