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  • Top cofit genes for GFF1603 from Variovorax sp. SCN45

    Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.69
    2 GFF4828 no description no 0.66
    3 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.64
    4 GFF1714 no description no 0.62
    5 GFF2316 FIG015547: peptidase, M16 family no 0.60
    6 GFF1702 hypothetical protein no 0.60
    7 GFF2526 no description no 0.59
    8 GFF1598 no description no 0.58
    9 GFF6923 Acetate permease ActP (cation/acetate symporter) no 0.58
    10 GFF707 probable integral membrane protein NMA1898 no 0.58
    11 GFF2838 hypothetical protein no 0.57
    12 GFF2405 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.57
    13 GFF5927 3-oxoacyl-[ACP] synthase no 0.56
    14 GFF658 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.55
    15 GFF7382 hypothetical protein AF1210 no 0.55
    16 GFF1665 Nicotinamidase/isochorismatase family protein 0.30 0.54
    17 GFF1085 no description no 0.54
    18 GFF6434 Inner membrane protein YqiK no 0.54
    19 GFF3770 hypothetical protein no 0.53
    20 GFF1629 Ferric reductase (1.6.99.14) no 0.53

    Or look for negative cofitness