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  • Top cofit genes for GFF1596 from Variovorax sp. SCN45

    Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF675 KEGG: 2'-5' RNA ligase no 0.66
    2 GFF5266 Transaldolase (EC 2.2.1.2) 0.43 0.60
    3 GFF81 Bll6900 protein no 0.57
    4 GFF1927 Alkanesulfonates-binding protein no 0.56
    5 GFF907 Transcriptional regulator, LysR family no 0.56
    6 GFF2960 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.55
    7 GFF1154 Putative transmembrane protein no 0.55
    8 GFF2050 hypothetical protein no 0.55
    9 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.55
    10 GFF5030 no description no 0.53
    11 GFF6834 no description no 0.53
    12 GFF5121 Probable signal peptide protein no 0.53
    13 GFF2261 Adenylate cyclase (EC 4.6.1.1) no 0.53
    14 GFF107 General secretion pathway protein K no 0.53
    15 GFF6452 Putative diheme cytochrome c-553 no 0.53
    16 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.51
    17 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.51
    18 GFF3489 Transcriptional regulator, AcrR family no 0.51
    19 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.51
    20 GFF3869 Putative transmembrane protein no 0.50

    Or look for negative cofitness