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  • Top cofit genes for PS417_08085 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12610 RNA polymerase sigma factor no 0.36
    2 PS417_21045 cysteine synthase no 0.36
    3 PS417_13425 cupin no 0.33
    4 PS417_21040 sulfurylase no 0.33
    5 PS417_15335 hypothetical protein no 0.32
    6 PS417_04995 glutathione S-transferase no 0.32
    7 PS417_27475 membrane protein no 0.30
    8 PS417_09755 hypothetical protein no 0.30
    9 PS417_06365 RNA polymerase sigma factor no 0.30
    10 PS417_00840 hypothetical protein no 0.30
    11 PS417_16070 TonB-dependent receptor no 0.30
    12 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.29
    13 PS417_21050 serine acetyltransferase no 0.29
    14 PS417_12825 MFS transporter 0.13 0.28
    15 PS417_24820 ethanolamine ammonia-lyase 0.31 0.28
    16 PS417_21945 RNA polymerase subunit sigma-24 no 0.28
    17 PS417_16370 chemotaxis protein CheY 0.26 0.28
    18 PS417_10720 chemotaxis protein CheY 0.31 0.28
    19 PS417_01015 polar amino acid ABC transporter permease no 0.28
    20 PS417_10090 hypothetical protein no 0.28

    Or look for negative cofitness