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  • Top cofit genes for GFF1582 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF711 KEGG: ribose transport system permease protein no 0.53
    2 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.53
    3 GFF6060 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.51
    4 GFF2598 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) no 0.50
    5 GFF107 General secretion pathway protein K no 0.49
    6 GFF6776 Maltodextrin ABC transporter, permease protein MdxG no 0.49
    7 GFF5232 5'-nucleotidase (EC 3.1.3.5) no 0.47
    8 GFF1837 Transcriptional regulator, LysR family no 0.47
    9 GFF1054 Catechol 2,3-dioxygenase (EC 1.13.11.2) no 0.47
    10 GFF2001 Putative phosphatase YieH no 0.46
    11 GFF6435 no description no 0.46
    12 GFF2180 hypothetical protein no 0.46
    13 GFF2187 ATPase associated with various cellular activities, AAA_5 no 0.46
    14 GFF958 ElaB protein no 0.45
    15 GFF6903 Transcriptional regulator, LysR family no 0.45
    16 GFF5017 Translation initiation factor SUI1-related protein no 0.45
    17 GFF2050 hypothetical protein no 0.45
    18 GFF590 Transcriptional regulator, LysR family no 0.44
    19 GFF2624 hypothetical protein no 0.44
    20 GFF2771 BUG/TctC family periplasmic protein no 0.44

    Or look for negative cofitness