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  • Top cofit genes for PS417_08030 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: LysR-family transcriptional regulator YdhB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08035 adenine transporter (MFS superfamily) (from data) 0.81 0.48
    2 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) no 0.25
    3 PS417_08610 deoxyguanosinetriphosphate triphosphohydrolase 0.39 0.24
    4 PS417_19290 long-chain acyl-CoA synthetase no 0.24
    5 PS417_02425 thiosulfate sulfurtransferase 0.44 0.23
    6 PS417_21930 membrane protein no 0.23
    7 PS417_11930 hypothetical protein no 0.23
    8 PS417_24950 hypothetical protein no 0.21
    9 PS417_25220 iron-hydroxamate ABC transporter substrate-binding protein no 0.21
    10 PS417_00830 hypothetical protein no 0.21
    11 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.39 0.20
    12 PS417_07485 hypothetical protein no 0.20
    13 PS417_05650 leucyl-tRNA synthetase no 0.19
    14 PS417_20195 sodium:solute symporter 0.47 0.19
    15 PS417_25985 dethiobiotin synthetase 0.61 0.18
    16 PS417_03205 adenine deaminase 0.33 0.17
    17 PS417_06450 iron ABC transporter substrate-binding protein no 0.17
    18 PS417_25210 TonB-dependent receptor no 0.17
    19 PS417_03355 cation transporter 0.59 0.17
    20 PS417_26065 RNA polymerase sigma factor no 0.17

    Or look for negative cofitness