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  • Top cofit genes for GFF1575 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.65
    2 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.64
    3 GFF2663 FIG022979: MoxR-like ATPases no 0.61
    4 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) no 0.60
    5 GFF3999 GMP reductase (EC 1.7.1.7) no 0.58
    6 GFF1792 Transcriptional regulator, IclR family no 0.57
    7 GFF1741 UPF0324 inner membrane protein YeiH no 0.57
    8 GFF6224 T6SS component TssK (ImpJ/VasE) no 0.57
    9 GFF6394 Lipase precursor (EC 3.1.1.3) no 0.55
    10 GFF6462 Integral membrane protein no 0.54
    11 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.54
    12 GFF7129 Mobile element protein no 0.53
    13 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.53
    14 GFF1188 Thiazole synthase (EC 2.8.1.10) no 0.53
    15 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.52
    16 GFF2227 Tricarboxylate transport protein TctC no 0.52
    17 GFF2218 FIG00455441: hypothetical protein no 0.51
    18 GFF6928 Putative transmembrane protein no 0.51
    19 GFF313 FIG027190: Putative transmembrane protein no 0.51
    20 GFF3550 hypothetical protein no 0.51

    Or look for negative cofitness