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  • Top cofit genes for GFF1572 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3156 FIG00441737: hypothetical protein no 0.57
    2 GFF4429 Inner membrane protein YpjD no 0.56
    3 GFF6010 MmgE/PrpD family protein no 0.52
    4 GFF6848 Biopolymer transport protein ExbD/TolR no 0.51
    5 GFF3060 Dihydrodipicolinate synthase family no 0.51
    6 GFF2594 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.50
    7 GFF4845 Conjugative transfer protein TrbJ no 0.50
    8 GFF2591 Virulence factor mviM no 0.49
    9 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.49
    10 GFF189 Negative transcriptional regulator no 0.49
    11 GFF3054 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) no 0.48
    12 GFF4824 Transcriptional regulator, AraC family 0.17 0.47
    13 GFF5721 Flagellar L-ring protein FlgH 0.31 0.47
    14 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.47
    15 GFF7249 no description no 0.46
    16 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.45
    17 GFF3018 VgrG protein 0.34 0.45
    18 GFF6665 Autolysin sensor kinase (EC 2.7.3.-) no 0.45
    19 GFF4133 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; sulfonate monooxygenase no 0.45
    20 GFF1257 Organosulfonate utilization protein SsuF no 0.45

    Or look for negative cofitness