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Cofit
Protein
Homologs
Top cofit genes for GFF1572 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3156
FIG00441737: hypothetical protein
no
0.57
2
GFF4429
Inner membrane protein YpjD
no
0.56
3
GFF6010
MmgE/PrpD family protein
no
0.52
4
GFF6848
Biopolymer transport protein ExbD/TolR
no
0.51
5
GFF3060
Dihydrodipicolinate synthase family
no
0.51
6
GFF2594
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)
no
0.50
7
GFF4845
Conjugative transfer protein TrbJ
no
0.50
8
GFF2591
Virulence factor mviM
no
0.49
9
GFF6070
Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13)
no
0.49
10
GFF189
Negative transcriptional regulator
no
0.49
11
GFF3054
Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14)
no
0.48
12
GFF4824
Transcriptional regulator, AraC family
0.17
0.47
13
GFF5721
Flagellar L-ring protein FlgH
0.31
0.47
14
GFF6706
ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92)
no
0.47
15
GFF7249
no description
no
0.46
16
GFF3304
Monofunctional biosynthetic peptidoglycan transglycosylase
no
0.45
17
GFF3018
VgrG protein
0.34
0.45
18
GFF6665
Autolysin sensor kinase (EC 2.7.3.-)
no
0.45
19
GFF4133
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; sulfonate monooxygenase
no
0.45
20
GFF1257
Organosulfonate utilization protein SsuF
no
0.45
Or look for
negative cofitness