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    • Top cofit genes for GFF1571 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: probable LysR-family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) no 0.55
    2 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) no 0.49
    3 GFF1537 FIG01127817: hypothetical protein no 0.48
    4 GFF4815 Glucose-fructose oxidoreductase (EC 1.1.99.28) no 0.48
    5 GFF4020 Arsenic resistance protein ArsH no 0.48
    6 GFF5056 Fumarylacetoacetase (EC 3.7.1.2) no 0.47
    7 GFF3093 FIG138056: a glutathione-dependent thiol reductase no 0.47
    8 GFF297 FIG00978250: hypothetical protein no 0.47
    9 GFF1471 Uncharacterized MFS-type transporter no 0.46
    10 GFF2494 Threonine-synthase-like protein 4 no 0.45
    11 GFF6088 Phenylacetic acid degradation protein PaaY no 0.44
    12 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.44
    13 GFF3258 hypothetical protein no 0.44
    14 GFF4964 Sulfate permease no 0.44
    15 GFF862 hypothetical protein no 0.44
    16 GFF4810 Ferrichrome-iron receptor no 0.43
    17 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) no 0.43
    18 GFF4874 Plasmid replication initiator protein no 0.43
    19 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) no 0.43
    20 GFF4356 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.43

    Or look for negative cofitness