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  • Top cofit genes for GFF157 from Variovorax sp. SCN45

    Methyltransferase type 12
    SEED: Methyltransferase type 12

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4576 BUG/TctC family periplasmic protein no 0.62
    2 GFF7411 no description no 0.61
    3 GFF5260 Uncharacterized protein ygiD no 0.58
    4 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) no 0.54
    5 GFF4204 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.54
    6 GFF3100 Aspartyl protease no 0.54
    7 GFF4565 GGDEF domain protein no 0.54
    8 GFF3075 Surface antigen no 0.53
    9 GFF211 protein of unknown function UPF0125 no 0.53
    10 GFF2337 hypothetical protein no 0.53
    11 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.52
    12 GFF4174 FIG00919961: hypothetical protein no 0.52
    13 GFF5407 Membrane protein TerC, possibly involved in tellurium resistance no 0.52
    14 GFF2899 no description no 0.51
    15 GFF412 Transcription-repair coupling factor 0.36 0.49
    16 GFF1812 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    17 GFF2253 no description no 0.49
    18 GFF2079 BUG/TctC family periplasmic protein no 0.49
    19 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    20 GFF1338 ABC transporter, permease protein 1 RSc1751 no 0.49

    Or look for negative cofitness