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  • Top cofit genes for GFF1567 from Sphingobium sp. HT1-2

    Efflux ABC transporter, permease protein
    SEED: ABC-type multidrug transport system, permease component
    KEGG: ABC-2 type transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF189 Conjugative transfer protein TrbC no 0.86
    2 GFF3347 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.82
    3 GFF1417 C-4 methylsterol oxidase no 0.78
    4 GFF1488 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.78
    5 GFF2173 hypothetical protein no 0.78
    6 GFF2735 Uncharacterized MFS-type transporter no 0.77
    7 GFF5042 hypothetical protein no 0.76
    8 GFF409 Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9) no 0.75
    9 GFF2529 hypothetical protein no 0.75
    10 GFF1732 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) no 0.74
    11 GFF1842 hypothetical protein no 0.74
    12 GFF4908 predicted lactoylglutathione lyase no 0.74
    13 GFF373 hypothetical protein no 0.73
    14 GFF4362 hypothetical protein no 0.73
    15 GFF3608 hypothetical protein no 0.73
    16 GFF4229 hypothetical protein no 0.72
    17 GFF3317 Peptide chain release factor 3 0.75 0.72
    18 GFF4679 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.72
    19 GFF315 pyridoxal-phosphate dependent enzyme family protein 0.55 0.72
    20 GFF2985 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.53 0.72

    Or look for negative cofitness