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  • Top cofit genes for PS417_07955 from Pseudomonas simiae WCS417

    malate:quinone oxidoreductase
    SEED: Malate:quinone oxidoreductase (EC 1.1.5.4)
    KEGG: malate dehydrogenase (quinone)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11460 divalent metal cation transporter MntH 0.21 0.46
    2 PS417_00440 N-acetylmuramoyl-L-alanine amidase no 0.42
    3 PS417_25405 catalase no 0.42
    4 PS417_26500 thioesterase no 0.41
    5 PS417_07515 aconitate hydratase no 0.40
    6 PS417_00475 membrane protein 0.37 0.35
    7 PS417_05590 iron ABC transporter ATP-binding protein no 0.34
    8 PS417_00665 RND transporter 0.31 0.33
    9 PS417_03990 ligand-gated channel protein no 0.33
    10 PS417_00655 DSBA oxidoreductase 0.37 0.32
    11 PS417_15075 NAD-glutamate dehydrogenase no 0.31
    12 PS417_10645 magnesium ABC transporter ATPase 0.58 0.31
    13 PS417_00660 DSBA oxidoreductase no 0.30
    14 PS417_13870 hypothetical protein no 0.30
    15 PS417_01550 cell envelope biogenesis protein AsmA 0.41 0.30
    16 PS417_02255 lipopolysaccharide kinase no 0.29
    17 PS417_26365 EmrB/QacA subfamily drug resistance transporter 0.29 0.29
    18 PS417_06325 LysR family transcriptional regulator no 0.29
    19 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.41 0.28
    20 PS417_03830 protein disaggregation chaperone 0.80 0.28

    Or look for negative cofitness