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  • Top cofit genes for GFF1562 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.62
    2 GFF4465 Transcriptional regulator, LysR family no 0.60
    3 GFF3646 Histone acetyltransferase HPA2 and related acetyltransferases no 0.58
    4 GFF6461 Thioesterase superfamily no 0.54
    5 GFF7062 probable carboxylesterase no 0.54
    6 GFF34 Uncharacterized metal-dependent hydrolase YcfH 0.42 0.52
    7 GFF53 Polyketide synthase modules and related proteins no 0.51
    8 GFF6834 no description no 0.51
    9 GFF1830 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 no 0.51
    10 GFF3319 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.50
    11 GFF5996 BUG/TctC family periplasmic protein no 0.49
    12 GFF848 no description no 0.49
    13 GFF4218 no description no 0.49
    14 GFF4209 no description no 0.48
    15 GFF6555 no description no 0.48
    16 GFF4918 hypothetical protein no 0.47
    17 GFF6757 no description no 0.47
    18 GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.47
    19 GFF5188 no description no 0.47
    20 GFF4179 hypothetical protein no 0.46

    Or look for negative cofitness