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  • Top cofit genes for GFF1558 from Variovorax sp. SCN45

    Uncharacterized ATP-dependent DNA helicase PA3272
    SEED: Lhr-like helicases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.59
    2 GFF617 no description no 0.58
    3 GFF5068 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.57
    4 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.57
    5 GFF672 Transcriptional regulator, LysR family no 0.55
    6 GFF1027 Ribonuclease BN no 0.55
    7 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) 0.50 0.53
    8 GFF6109 FIG00986406: hypothetical protein no 0.53
    9 GFF3385 Flavin-containing monooxygenase 0.49 0.53
    10 GFF2247 hypothetical protein no 0.52
    11 GFF1081 hypothetical protein no 0.50
    12 GFF522 RND efflux system, inner membrane transporter no 0.50
    13 GFF7365 no description no 0.49
    14 GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) no 0.49
    15 GFF1295 FIG00455815: hypothetical protein no 0.49
    16 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein no 0.49
    17 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.49
    18 GFF4642 no description no 0.48
    19 GFF7333 Transcriptional regulator, MerR family no 0.48
    20 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.47

    Or look for negative cofitness