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  • Top cofit genes for GFF1546 from Variovorax sp. SCN45

    Tripartite tricarboxylate transporter TctA family
    SEED: Tricarboxylate transport membrane protein TctA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3401 P-hydroxylaminobenzoate lyase no 0.64
    2 GFF6128 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) 0.30 0.61
    3 GFF4844 Conjugative transfer protein TrbL no 0.60
    4 GFF4774 Broad-specificity amino acid ABC transporter, ATP-binding protein 2 no 0.60
    5 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) no 0.58
    6 GFF310 FIG025233: SAM-dependent methyltransferases no 0.58
    7 GFF6528 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.33 0.58
    8 GFF2561 FIG00931134: hypothetical protein no 0.58
    9 GFF2108 hypothetical protein no 0.57
    10 GFF1404 hypothetical protein no 0.57
    11 GFF5390 RecA protein no 0.56
    12 GFF4741 Small heat shock protein no 0.56
    13 GFF3525 Protein tyrosine/serine phosphatase no 0.56
    14 GFF2444 Integral membrane protein, interacts with FtsH no 0.56
    15 GFF215 RNA polymerase sigma-54 factor RpoN no 0.56
    16 GFF1710 hypothetical protein no 0.55
    17 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.55
    18 GFF3957 Ribosome small subunit biogenesis RbfA-release protein RsgA no 0.55
    19 GFF5511 FIG000875: Thioredoxin domain-containing protein EC-YbbN no 0.54
    20 GFF3367 Septum site-determining protein MinC no 0.54

    Or look for negative cofitness