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  • Top cofit genes for GFF1545 from Variovorax sp. SCN45

    Pyruvate dehydrogenase (quinone) (EC 1.2.5.1)
    SEED: Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2)
    KEGG: pyruvate dehydrogenase (quinone)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7021 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.54
    2 GFF6099 Ser/Thr protein phosphatase family protein no 0.48
    3 GFF1307 Homoserine dehydrogenase (EC 1.1.1.3) no 0.47
    4 GFF7142 Transcriptional regulator, LysR family 0.48 0.46
    5 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein no 0.45
    6 GFF4319 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.45
    7 GFF6336 no description no 0.44
    8 GFF763 Transporter, LysE family no 0.44
    9 GFF955 N-acetylmuramoyl-L-alanine amidase, family 2 no 0.44
    10 GFF4420 Conjugative transfer protein TrbL no 0.44
    11 GFF3672 no description no 0.44
    12 GFF2134 probable iron-sulfur binding protein YPO1417 no 0.44
    13 GFF135 no description 0.51 0.44
    14 GFF6058 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.43
    15 GFF4875 hypothetical protein no 0.43
    16 GFF905 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.43
    17 GFF4440 Ribosomal protein L11 methyltransferase no 0.42
    18 GFF1212 Oligopeptide transport permease protein OppC-like @ Glutathione ABC transporter, permease protein GsiD 0.38 0.42
    19 GFF1192 no description no 0.42
    20 GFF1198 no description no 0.42

    Or look for negative cofitness