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  • Top cofit genes for GFF1541 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Flagellar synthesis: repressor of fliC
    SEED: Flagellar synthesis: repressor of fliC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3350 Flagellar biosynthesis protein FlgN no 0.45
    2 GFF3426 Virulence protein MsgA no 0.44
    3 GFF2718 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) no 0.42
    4 GFF2541 putative cytoplasmic protein no 0.40
    5 GFF2473 DNA recombination and repair protein RecO no 0.39
    6 GFF1271 GtgA no 0.38
    7 GFF1568 gamma-aminobutyrate (GABA) permease no 0.38
    8 GFF3361 Flagellar P-ring protein FlgI no 0.38
    9 GFF4007 Flagellar biosynthesis protein FliQ no 0.38
    10 GFF3423 FIG00643583: hypothetical protein no 0.37
    11 GFF2829 Rtn protein no 0.37
    12 GFF356 'tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)' transl_table=11 no 0.37
    13 GFF241 ATP-dependent DNA helicase UvrD/PcrA no 0.37
    14 GFF4021 FIG01200701: possible membrane protein no 0.36
    15 GFF3058 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB no 0.36
    16 GFF2615 LysR family transcriptional regulator YdcI no 0.36
    17 GFF4162 DNA repair protein RecN no 0.36
    18 GFF764 Ascorbate-specific PTS system, EIIC component no 0.35
    19 GFF2721 COG0613, Predicted metal-dependent phosphoesterases (PHP family) no 0.35
    20 GFF1802 Outer membrane protein N precursor no 0.35

    Or look for negative cofitness