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  • Top cofit genes for GFF1539 from Variovorax sp. SCN45

    RsbT co-antagonist protein RsbRA
    SEED: RsbR, positive regulator of sigma-B

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1710 hypothetical protein no 0.62
    2 GFF7043 Putative transmembrane protein no 0.59
    3 GFF2968 MaoC-like dehydratase no 0.56
    4 GFF1729 HIPA PROTEIN no 0.56
    5 GFF2367 Transcriptional regulator, LysR family no 0.56
    6 GFF6480 hypothetical protein no 0.54
    7 GFF2400 no description no 0.54
    8 GFF5218 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.54
    9 GFF5879 LemA no 0.53
    10 GFF680 RecA/RadA recombinase no 0.53
    11 GFF438 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) no 0.53
    12 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.53
    13 GFF4277 Small subunit naph/bph dioxygenase no 0.52
    14 GFF1790 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.52
    15 GFF4112 Rhodanese-related sulfurtransferase, 4 domains no 0.52
    16 GFF745 BUG/TctC family periplasmic protein no 0.51
    17 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.50
    18 GFF3789 hypothetical protein no 0.50
    19 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.50
    20 GFF4328 hypothetical protein no 0.50

    Or look for negative cofitness