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  • Top cofit genes for GFF1535 from Variovorax sp. SCN45

    Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3065 hypothetical protein no 0.50
    2 GFF7273 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.50
    3 GFF5819 no description no 0.49
    4 GFF1663 Isocitrate lyase (EC 4.1.3.1) no 0.48
    5 GFF7210 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.48
    6 GFF4707 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.48
    7 GFF5213 hypothetical protein no 0.47
    8 GFF810 Glutathione S-transferase (EC 2.5.1.18) no 0.47
    9 GFF5797 no description no 0.45
    10 GFF4528 Permease of the drug/metabolite transporter (DMT) superfamily no 0.44
    11 GFF3445 Cupin 2, conserved barrel no 0.44
    12 GFF3986 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.43
    13 GFF3427 FIG01006093: hypothetical protein no 0.43
    14 GFF3428 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.43
    15 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.42
    16 GFF7058 Zinc-binding GTPase YciC no 0.41
    17 GFF3752 KEGG: catechol 2,3-dioxygenase no 0.41
    18 GFF1947 no description no 0.41
    19 GFF3023 C4-dicarboxylate transport protein no 0.41
    20 GFF6312 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.41

    Or look for negative cofitness