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  • Top cofit genes for GFF153 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6229 hypothetical protein no 0.65
    2 GFF4023 no description no 0.61
    3 GFF7076 no description no 0.58
    4 GFF6543 Transcriptional regulator, LysR family no 0.57
    5 GFF4209 no description no 0.56
    6 GFF6615 putative plasmid stabilization protein no 0.56
    7 GFF2630 Ligand-binding SRPBCC domain protein family no 0.56
    8 GFF2267 Integral membrane protein no 0.56
    9 GFF5243 General secretion pathway protein H no 0.56
    10 GFF2884 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.56
    11 GFF3748 KEGG: dihydrodipicolinate synthase no 0.55
    12 GFF4906 hypothetical protein no 0.54
    13 GFF2778 Fosmidomycin resistance protein no 0.54
    14 GFF1426 Phenylacetate ABC transporter, ATP-binding protein 2 no 0.52
    15 GFF1317 no description no 0.51
    16 GFF6566 hypothetical protein no 0.51
    17 GFF5845 NAD synthetase (EC 6.3.1.5) no 0.51
    18 GFF3936 no description no 0.49
    19 GFF6243 Ku domain protein no 0.49
    20 GFF3984 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.49

    Or look for negative cofitness