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  • Top cofit genes for GFF1529 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7223 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.59
    2 GFF595 Transcriptional regulator, LysR family no 0.55
    3 GFF3982 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.54
    4 GFF3018 VgrG protein no 0.53
    5 GFF1916 YpfJ protein, zinc metalloprotease superfamily no 0.52
    6 GFF5928 hypothetical protein no 0.52
    7 GFF1074 no description no 0.52
    8 GFF943 Intracellular PHB depolymerase no 0.51
    9 GFF7192 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    10 GFF106 no description no 0.50
    11 GFF2619 Rhs-family protein no 0.49
    12 GFF1461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    13 GFF1935 GNAT family acetyltransferase PA5433 no 0.49
    14 GFF5133 hypothetical protein no 0.49
    15 GFF5631 DNA-binding domain of ModE no 0.49
    16 GFF7278 Transposase no 0.49
    17 GFF1918 hypothetical protein no 0.49
    18 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.48
    19 GFF6005 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    20 GFF5328 FIG00537720: hypothetical protein no 0.48

    Or look for negative cofitness