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Cofit
Protein
Homologs
Top cofit genes for GFF1526 from
Variovorax sp. SCN45
putative transmembrane sensor
SEED: putative transmembrane sensor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF240
Cytosol aminopeptidase PepA (EC 3.4.11.1)
no
0.68
2
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.64
3
GFF2354
FIG00555615: hypothetical protein
no
0.61
4
GFF6594
Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
no
0.61
5
GFF3726
RND efflux system, membrane fusion protein
no
0.60
6
GFF649
no description
no
0.58
7
GFF549
DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
no
0.57
8
GFF1119
Ribonuclease HI (EC 3.1.26.4)
no
0.57
9
GFF5208
Efflux ABC transporter, permease/ATP-binding protein Reut_A2584
no
0.57
10
GFF2267
Integral membrane protein
no
0.57
11
GFF2506
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
no
0.55
12
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.55
13
GFF3627
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
no
0.55
14
GFF2505
hypothetical protein
no
0.54
15
GFF3619
no description
no
0.54
16
GFF5429
Iron(III) dicitrate transport protein FecA
no
0.53
17
GFF3778
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase
no
0.53
18
GFF3624
Putative transmembrane protein
no
0.52
19
GFF2835
putative TonB-dependent receptor
no
0.52
20
GFF2836
MotA/TolQ/ExbB proton channel family protein
no
0.52
Or look for
negative cofitness