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  • Top cofit genes for GFF1523 from Variovorax sp. SCN45

    KEGG: transmembrane sensor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.60
    2 GFF2482 Urease accessory protein UreE no 0.59
    3 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) 0.26 0.55
    4 GFF4871 FIG00457034: hypothetical protein no 0.53
    5 GFF7077 no description no 0.51
    6 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.49
    7 GFF1764 hypothetical protein no 0.48
    8 GFF307 FIG143263: Glycosyl transferase no 0.48
    9 GFF7242 hypothetical protein no 0.48
    10 GFF939 Transcriptional regulator, AsnC family no 0.48
    11 GFF4378 HYPOTHETICAL/UNKNOWN PROTEIN no 0.48
    12 GFF7034 FIG00538743: hypothetical protein no 0.47
    13 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.46
    14 GFF3165 Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) no 0.46
    15 GFF6623 Esterase/lipase no 0.46
    16 GFF2207 Flp pilus assembly protein TadB no 0.46
    17 GFF3532 Two-component system response regulator QseB no 0.45
    18 GFF3218 Phage tail fiber no 0.45
    19 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 no 0.45
    20 GFF1346 hypothetical protein no 0.44

    Or look for negative cofitness