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Cofit
Protein
Homologs
Top cofit genes for GFF1523 from
Variovorax sp. SCN45
KEGG: transmembrane sensor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF839
Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)
no
0.60
2
GFF2482
Urease accessory protein UreE
no
0.59
3
GFF4610
Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8)
0.26
0.55
4
GFF4871
FIG00457034: hypothetical protein
no
0.53
5
GFF7077
no description
no
0.51
6
GFF3562
UDP-glucose 6-dehydrogenase (EC 1.1.1.22)
no
0.49
7
GFF1764
hypothetical protein
no
0.48
8
GFF307
FIG143263: Glycosyl transferase
no
0.48
9
GFF7242
hypothetical protein
no
0.48
10
GFF939
Transcriptional regulator, AsnC family
no
0.48
11
GFF4378
HYPOTHETICAL/UNKNOWN PROTEIN
no
0.48
12
GFF7034
FIG00538743: hypothetical protein
no
0.47
13
GFF2658
3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)
no
0.46
14
GFF3165
Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2)
no
0.46
15
GFF6623
Esterase/lipase
no
0.46
16
GFF2207
Flp pilus assembly protein TadB
no
0.46
17
GFF3532
Two-component system response regulator QseB
no
0.45
18
GFF3218
Phage tail fiber
no
0.45
19
GFF1831
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3
no
0.45
20
GFF1346
hypothetical protein
no
0.44
Or look for
negative cofitness