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  • Top cofit genes for GFF1507 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7323 Transcriptional response regulatory protein GlrR no 0.67
    2 GFF765 hypothetical protein no 0.63
    3 GFF7375 Arginine:pyruvate transaminase no 0.62
    4 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.58
    5 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.56
    6 GFF5248 Outer membrane porin protein 32 precursor no 0.55
    7 GFF5898 FIG026291: Hypothetical periplasmic protein no 0.54
    8 GFF259 Bis-ABC ATPase YheS no 0.54
    9 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.54
    10 GFF1605 no description no 0.54
    11 GFF1315 Cyclic di-GMP-binding protein BcsB no 0.53
    12 GFF6918 Transcriptional regulator, AraC family no 0.52
    13 GFF304 Ubiquinone/menaquinone biosynthesis methyltransferase family protein no 0.52
    14 GFF6481 Bll1370 protein no 0.52
    15 GFF4397 hypothetical protein no 0.51
    16 GFF402 hypothetical protein no 0.51
    17 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) no 0.51
    18 GFF4425 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) no 0.51
    19 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.51
    20 GFF4405 hypothetical protein no 0.50

    Or look for negative cofitness